PERL and BioPERL are the programming languages that are very important for Biological researchers who are working in computational biology. The programs provide the basic knowledge in both theory and practical applications. The introduction provides the basics on these programming languages and the execution in windows.
Inhaltsverzeichnis (Table of Contents)
- Chapter 1: PERL
- PERL installation and execution (windows)
- CPAN
- BioPERL
Zielsetzung und Themenschwerpunkte (Objectives and Key Themes)
This book provides a comprehensive guide to PERL programming, particularly emphasizing its applications in bioinformatics. It focuses on equipping readers with the practical skills to work with PERL in biological data analysis.
- Introduction to PERL and its features
- PERL installation and execution in a Windows environment
- Practical examples and programs demonstrating bioinformatics applications of PERL
- Introduction to BioPERL and its capabilities
- Utilizing BioPERL for biological data analysis
Zusammenfassung der Kapitel (Chapter Summaries)
- Chapter 1: PERL introduces the PERL programming language, its history, and its key features. It provides an overview of its capabilities, including its role in text processing and data analysis.
- Chapter 2: PERL installation and execution (windows) offers a step-by-step guide on setting up and running PERL on a Windows operating system. It includes various illustrative programs demonstrating core concepts like concatenation, reverse complement, and DNA manipulation.
- Chapter 3: CPAN explores the Comprehensive Perl Archive Network (CPAN), a vast repository of Perl modules and libraries. It covers the benefits of using CPAN for expanding PERL's functionality.
- Chapter 4: BioPERL delves into the BioPERL module, specifically designed for bioinformatics applications. The chapter demonstrates how to use BioPERL for tasks such as sequence translation, BLAST analysis, and data parsing.
Schlüsselwörter (Keywords)
This text focuses on practical PERL programming, emphasizing its use in bioinformatics. Key concepts include PERL installation, execution, data analysis, string manipulation, sequence analysis, BioPERL modules, BLAST, and bioinformatics tools.
- Citation du texte
- Kaladhar DSVGK (Auteur), 2014, Basics in PERL and BioPERL, Munich, GRIN Verlag, https://www.grin.com/document/267659
